osmose.plotting

Pure chart functions for OSMOSE outputs — all return go.Figure.

Functions

make_abc_plot(abc)	Cumulative %-dominance curves (biomass vs abundance) over species rank — ABC.
make_biomass_overlay(long_a, long_b, species, *)	Overlay per-species biomass trajectories from two runs (A solid, B dashed).
make_ci_timeseries(time, mean, lower, upper, ...)	Time series with confidence-interval band.
make_fm_ratio_bars(balances)	F/M (fishing vs natural mortality) per species; reference line at F/M=1.
make_food_web(diet_df[, threshold])	Sankey diagram of predator-prey relationships.
make_growth_curves(species_params)	Von Bertalanffy L(t) growth curves.
make_kobe_plot(statuses, *[, year])	Indicative Kobe scatter: x=B/Bmsy, y=F/Fmsy, soft-shaded quadrants.
make_mortality_breakdown(df[, species])	Stacked area of mortality by source.
make_predation_ranges(species_params)	Horizontal bar chart of predation size-ratio ranges.
make_ratio_timeseries(statuses, which)	Time-series of B/Bmsy (which='b') or F/Fmsy (which='f') per species.
make_run_comparison(records[, metrics])	Grouped bar chart comparing summary stats across runs.
make_run_delta_chart(deltas, *[, metric])	Horizontal diverging bar of per-species % change (variant vs baseline).
make_sheldon_spectrum_plot(spec)	Log-log Sheldon NBSS scatter (mass-bin midpoint vs normalized biomass) + fit line.
make_size_indicator_timeseries(df)	Community size-indicators over time: slope, LFI, mean size (3 traces).
make_size_spectrum_plot(df)	Log-log scatter with linear regression line and slope annotation.
make_species_dashboard(biomass_df, yield_df)	Small multiples: one row per species with biomass + yield lines.
make_stacked_area(df, title[, species])	Stacked area chart from long-format DataFrame.